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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1477944 chr8:71615600 C/T XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs147837667 chr5:96280241 C/CT ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs148094324 chr7:64427932 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs148133629 chr5:96272095 G/GCGC ERAP2 chr5:96211643-96255420:+ 0.94 10.91 4.65E-15 Box Plot
ACC rs148206627 chr8:71690727 G/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs1487328 chr20:44247693 G/T WFDC3 chr20:44376583-44420571:- 0.81 5.93 2.47E-7 Box Plot
ACC rs1488415 chr3:6417184 C/T GRM7 chr3:6811688-7783220:+ 0.74 5.88 3.03E-7 Box Plot
ACC rs149045595 chr20:44524099 G/GCA WFDC3 chr20:44376583-44420571:- 0.75 5.06 5.61E-6 Box Plot
ACC rs1493198 chr8:71851957 G/A XKR9 chr8:71581600-71702606:+ 0.68 6.95 6.06E-9 Box Plot
ACC rs1493203 chr8:71926507 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs149362618 chr20:44367893 C/CAT WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs149646144 chr7:97408628 C/T TECPR1 chr7:97843936-97881563:- 0.91 5.85 3.28E-7 Box Plot
ACC rs150407805 chr8:124435675 TTTTCTTTC/T WDYHV1 chr8:124428965-124479470:+ 0.52 5.37 1.83E-6 Box Plot
ACC rs150754922 chr7:98204497 G/GC TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs150848131 chr7:64948115 G/C INTS4L1 chr7:64601603-64694600:+ 0.67 5.04 6.01E-6 Box Plot